EcoliWiki - User contributions [en]

FlyBase

2007-11-30T15:11:59Z

PeteFlyBase: /* Content */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=

Genomes of 12 Drosophila species, represented on GBrowse and available for BLAST

Genetics data for over 400 Drosophila species

Mutant phenotypes

Genetic Interactions

Molecular characterisation of mutant alleles and aberrations

Cytological maps

Wild-type expression patterns

Anatomical images

Transgenic constructs and insertions

Sequence-level gene models

GO data

Stocks

cDNA clones

Sequence data

OBO data

Drosophila researcher database

and much, much more!

=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175

'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T15:07:52Z

PeteFlyBase: /* About {{PAGENAME}} */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175

'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T15:02:04Z

PeteFlyBase: /* About {{PAGENAME}} */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

FlyBase contains information about the structure and function of genes and gene products of the Drosophila genome. Although the primary species represented is ''Drosophila melanogaster'', Flybase incorporates information on all ''Drosophilidae'', and now houses the genome data for eleven additional Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175

'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:55:49Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175

'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:55:35Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175
'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:55:20Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

== Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175
'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134. ==

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:52:47Z

PeteFlyBase: /* About {{PAGENAME}} */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=

[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is a database of genetic and molecular data for ''D. melanogaster'' and other Drosophila species.

=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175
'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:51:22Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=
''Add general information here''
[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is...
=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

'''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007)
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.

'''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006)
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.

'''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''' (2005)
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

'''The FlyBase Consortium''' (2003)
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175
'''Rachel Drysdale''' (2003)
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:49:25Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=
''Add general information here''
[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is...
=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

* '''M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium''' (2007).
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.
* '''G. Grumbling, V. Strelets and The FlyBase Consortium''' (2006).
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.
* '''R.A. Drysdale, M.A. Crosby and the FlyBase Consortium''', 2005.
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395

* '''The FlyBase Consortium, 2003'''.
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175
* '''Rachel Drysdale, 2003.'''
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134.

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==

FlyBase

2007-11-30T14:43:19Z

PeteFlyBase: /* References */

{{Pagetop}}
[[Category:Databases]]
[[Category:MODs]]
{|{{Prettytable}} width='30%' align = 'right'
|- align='center' bgcolor = '#ddddff'
| colspan = '2' | '''{{PAGENAME}}'''
|-
| width='30%' | Who:
| ''proprietor''
|-
| width='30%' | What:
| ''short description''
|-
| Where:
| [http://flybase.bio.indiana.edu/ {{PAGENAME}}]
|-
| Updates
|
|-
| Upcoming events
| ''link to event calendar, if applicable''
|-
| Web Services
|
|}
=About {{PAGENAME}}=
''Add general information here''
[http://flybase.bio.indiana.edu/ {{PAGENAME}}] is...
=Content=
=Using {{PAGENAME}}=
==Browsing==
==Searching==
==Usage examples==
''Add links to additional pages describing success stories here.''

=Other sites with related content=
=Technology=
==Web Services/API==
=Discussion=

=References=

Selected references (2003-2007)

* M.A. Crosby, J.L. Goodman, V.B. Strelets, P. Zhang, W.M Gelbart, and the FlyBase Consortium (2007).
FlyBase: genomes by the dozen.
Nucleic Acids Research 35: D486-D491; doi:10.1093/nar/gkl827.
* G. Grumbling, V. Strelets and The FlyBase Consortium (2006).
FlyBase: anatomical data, images and queries.
Nuc. Acid Res., 34: D484-D488; doi:10.1093/nar/gkj068.
* R.A. Drysdale, M.A. Crosby and the FlyBase Consortium, 2005.
FlyBase : Genes and gene models.
Nuc. Acid Res., 33: D390-D395 pdf [ 1 Mb, 10-Jan-05]
(Reproduced with permission from NAR Online )
* The FlyBase Consortium, 2003.
The FlyBase Database of the Drosophila Genome Projects and community literature.
Nuc. Acid Res., 31:172--175 pdf [ 62 kb] .. html [ 21 kb, 16-Dec-03]
(Reproduced with permission from NAR Online )
* Rachel Drysdale, 2003.
The Drosophila melanogaster genome sequencing and annotation projects: A status report.
Briefings in Functional Genomics and Proteomics, 2(2): 128--134. pdf [ 100 kb, 26-Jul-03]
(Reproduced with permission from Briefings in Functional Genomics and Proteomics)

=External Links=
[http://flybase.bio.indiana.edu/ {{PAGENAME}}]
==Discussion of {{PAGENAME}} on other websites==