dksA:Gene Product(s)

2007-08-09T20:39:14Z

Pchandrangsu: edited by Pchandrangsu via TableEdit

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{|
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|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Function |Function]]
|{{Sub}}[[#Interactions |Interactions]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Links |Links]]
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
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==Nomenclature==


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!{{table heading style}} |Standard name
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DksA product
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!{{table heading style}} |Synonyms
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RNAP-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein product<ref name='LIB:Riley_2006'/>, B0145 product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, MsmA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>, DksA product<ref name='LIB:EcoCyc10.6'/><ref name='LIB:Riley_2006'/>
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!{{table heading style}} |Product description
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RNAP-binding transcriptional regulator of rRNA transcription<ref name='LIB:EcoCyc10.6'/><ref name='LIB:EcoCyc11.1'/>

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!{{table heading style}} |EC number (for enzymes)
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*
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===Notes===

==Function==
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<big>'''Gene Ontology'''</big>


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!Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
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GO:0042594
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response to starvation
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P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing
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GO:0006412
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translation
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P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing
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GO:0009386
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translational attenuation
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P
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing
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GO:0005737
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cytoplasm
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C
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Seeded from EcoCyc 11.1<ref name='LIB:EcoCyc11.1'/>.
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required fields missing
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<big>'''Interactions'''</big>


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===Notes===

==Localization==


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!Compartment!!Description!!Evidence!!Notes
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===Notes===

==Structure and Physical Properties==
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<big>'''Physical Properties'''</big>


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!{{table heading style}} |Sequence
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[http://biocyc.org/ECOLI/sequence-aa?object=EG10230-MONOMER at EcoCyc]
<pre>MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNEAQLAHF RRILEAWRNQ LRDEVDRTVT
HMQDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIE KTLKKVEDED FGYCESCGVE
IGIRRLEARP TADLCIDCKT LAEIREKQMA G</pre>
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!{{table heading style}} |Mol. Wt
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17.53 kDa (calc) <ref name='LIB:EcoCyc10.6'/>
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!{{table heading style}} |pI
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!{{table heading style}} |Extinction coefficient
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9970 - 10470 (calc based on 3 Y, 1 W, and 4 C residues)
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<big>'''Domains/Motifs/Modification Sites'''</big>


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!Type!!Residues!!Description!!Notes
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<big>'''Structure'''</big>


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!Structure Type!!Organism!!Accession!!Residues covered!!Notes
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X-RAY DIFFRACTION

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Escherichia coli

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[http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1TJL 1TJL] Crystal structure of transcription factor DksA from E. coli
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===Notes===

==Gene Product Resources==
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!Resource type!!Source!!Notes/Reference
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===Notes===

==Accessions in Other Databases==
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!Database!!Accession!!Notes
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[http://ecocyc.org EcoCyc] ([[EcoCyc|EcoliWiki Page]])
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[http://biocyc.org/ECOLI/NEW-IMAGE?type=NIL&object=EG10230-MONOMER EcoCyc:EG10230-MONOMER]
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[http://uniprot.org/ UniProt] ([[UniProt|EcoliWiki Page]])
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[http://www.expasy.ch/cgi-bin/sprot-search-ac?P0ABS1 UniProt:P0ABS1]
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[http://www.sanger.ac.uk/Software/Pfam/ PFAM] ([[PFAM|EcoliWiki Page]])
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[http://www.sanger.ac.uk/cgi-bin/Pfam/getacc?PF01258 PFAM:PF01258]
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[http://www.ncbi.nlm.nih.gov/RefSeq/ RefSeq] ([[RefSeq|EcoliWiki Page]])
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[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=nucleotide&val=NP_414687 RefSeq:NP_414687]
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|-
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[http://www.rcsb.org/pdb PDB] ([[PDB|EcoliWiki Page]])
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[http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1TJL PDB:1TJL]
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===Notes===

==Links==
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==References==
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<references/>
__NOTOC__
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===Categories===
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[[Category:GO:0042594_!_response to starvation]][[Category:GO:0006412_!_translation]][[Category:GO:0009386_!_translational attenuation]][[Category:GO:0005737_!_cytoplasm]][[Category:Products with structures in PDB]]

EcoliWiki - User contributions [en]

dksA:Gene Product(s)