EcoliWiki - User contributions [en]

PMID:17543954

2012-03-20T14:59:32Z

Obriantkm: /* Useful Materials and Methods {{HelpIcon|Help:Literature}} */

{{RightTOC}}
<protect>
 '''Eydallin, G, Viale, AM, Morán-Zorzano, MT, Muñoz, FJ, Montero, M, Baroja-Fernández, E and Pozueta-Romero, J''' (2007) Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12.''FEBS Lett.'' '''581''':2947-53

{|{{Prettytable}} align = 'center' width= '70%'
|-
|{{TableHeadingColor}} |'''Abstract''' || <protect>A systematic and comprehensive gene-disrupted mutant collection of E. coli K-12 was used to identify genes whose deletions affect glycogen accumulation. Of the 3985 non-essential gene mutants of the collection, 35 displayed a glycogen-excess phenotype, whereas 30 displayed either glycogen-less or glycogen-deficient phenotypes. The genes whose deletions affect glycogen accumulation were classified into various functional categories, including energy production, envelope composition and integrity, protein translation and stability, transport of inorganic ions and nucleotides, and metabolism of carbohydrates and amino acids. The overall data indicate that glycogen metabolism is highly interconnected with a wide variety of cellular processes in E. coli.</protect>
|-
|{{TableHeadingColor}} nowrap |'''Links''' || [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17543954 PubMed] Online version:[http://dx.doi.org/10.1016/j.febslet.2007.05.044 10.1016/j.febslet.2007.05.044]
|}
</protect>
==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

The Keio collection<ref name= 'PMID: 16738554'/> was subjected to an iodine staining technique as a screening method for glycogen content in solid glucose Kornberg medium. Iodine vapor exposure causes glycogen-excess mutants to stain darker than parental cells, and glycogen-deficient mutants to stain lighter<ref name= 'PMID: 4886303'/> .

65 mutants were discovered to have quantitative glycogen levels of significant difference from the wild type. Gene deletion mutants resulted in glycogen-excess phenotypes (35 total) and glycogen-deficient/less phenotypes (30 total). See figures 1 and 2<ref name= 'PMID: 17543954'/> for reporting of quantitative glycogen content as a percentage of glycogen accumulated by the wild type cells.

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{| id="O4aecfe3be381d" class=" tableEdit GO_table_reference dataTable"
|- {{table heading style}}
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
clpP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cspC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
cysA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysI
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysK
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
deoT
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
fdx
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
galU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glgA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
glgX
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glnD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
greA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
hfq
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
lon
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mdtH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mgtA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
miaA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nlpD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nudB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
nusB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
phoP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoQ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pgm
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
proW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pstA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
purC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
purH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pyrE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rbfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rfaH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rnt
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpmJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpoN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rpoS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpsF
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
serA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ubiG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
ybhE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yciU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ydcS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ygdD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yhbG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ynfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yobG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yqgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.166519.O4aecfe3be381d&page=166519&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==See also==

==References==
{{RefHelp}}
<references/>

PMID:17543954

2012-03-20T14:57:53Z

Obriantkm: /* Useful Materials and Methods {{HelpIcon|Help:Literature}} */

{{RightTOC}}
<protect>
 '''Eydallin, G, Viale, AM, Morán-Zorzano, MT, Muñoz, FJ, Montero, M, Baroja-Fernández, E and Pozueta-Romero, J''' (2007) Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12.''FEBS Lett.'' '''581''':2947-53

{|{{Prettytable}} align = 'center' width= '70%'
|-
|{{TableHeadingColor}} |'''Abstract''' || <protect>A systematic and comprehensive gene-disrupted mutant collection of E. coli K-12 was used to identify genes whose deletions affect glycogen accumulation. Of the 3985 non-essential gene mutants of the collection, 35 displayed a glycogen-excess phenotype, whereas 30 displayed either glycogen-less or glycogen-deficient phenotypes. The genes whose deletions affect glycogen accumulation were classified into various functional categories, including energy production, envelope composition and integrity, protein translation and stability, transport of inorganic ions and nucleotides, and metabolism of carbohydrates and amino acids. The overall data indicate that glycogen metabolism is highly interconnected with a wide variety of cellular processes in E. coli.</protect>
|-
|{{TableHeadingColor}} nowrap |'''Links''' || [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17543954 PubMed] Online version:[http://dx.doi.org/10.1016/j.febslet.2007.05.044 10.1016/j.febslet.2007.05.044]
|}
</protect>
==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

The Keio collection <ref name= 'PMID: 16738554'/> was subjected to an iodine staining technique as a screening method for glycogen content in solid glucose Kornberg medium. Iodine vapor exposure causes glycogen-excess mutants to stain darker than parental cells, and glycogen-deficient mutants to stain lighter. <ref name= 'PMID: 4886303'/>

65 mutants were discovered to have quantitative glycogen levels of significant difference from the wild type. Gene deletion mutants resulted in glycogen-excess phenotypes (35 total) and glycogen-deficient/less phenotypes (30 total). See figures 1 and 2 for reporting of quantitative glycogen content as a percentage of glycogen accumulated by the wild type cells. <ref name= 'PMID: 17543954'/>

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{| id="O4aecfe3be381d" class=" tableEdit GO_table_reference dataTable"
|- {{table heading style}}
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
clpP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cspC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
cysA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysI
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysK
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
deoT
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
fdx
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
galU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glgA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
glgX
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glnD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
greA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
hfq
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
lon
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mdtH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mgtA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
miaA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nlpD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nudB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
nusB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
phoP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoQ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pgm
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
proW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pstA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
purC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
purH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pyrE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rbfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rfaH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rnt
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpmJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpoN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rpoS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpsF
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
serA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ubiG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
ybhE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yciU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ydcS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ygdD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yhbG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ynfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yobG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yqgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.166519.O4aecfe3be381d&page=166519&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==See also==

==References==
{{RefHelp}}
<references/>

PMID:17543954

2012-03-20T14:28:15Z

Obriantkm: Table edited by Obriantkm via TableEdit

{{RightTOC}}
<protect>
 '''Eydallin, G, Viale, AM, Morán-Zorzano, MT, Muñoz, FJ, Montero, M, Baroja-Fernández, E and Pozueta-Romero, J''' (2007) Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12.''FEBS Lett.'' '''581''':2947-53

{|{{Prettytable}} align = 'center' width= '70%'
|-
|{{TableHeadingColor}} |'''Abstract''' || <protect>A systematic and comprehensive gene-disrupted mutant collection of E. coli K-12 was used to identify genes whose deletions affect glycogen accumulation. Of the 3985 non-essential gene mutants of the collection, 35 displayed a glycogen-excess phenotype, whereas 30 displayed either glycogen-less or glycogen-deficient phenotypes. The genes whose deletions affect glycogen accumulation were classified into various functional categories, including energy production, envelope composition and integrity, protein translation and stability, transport of inorganic ions and nucleotides, and metabolism of carbohydrates and amino acids. The overall data indicate that glycogen metabolism is highly interconnected with a wide variety of cellular processes in E. coli.</protect>
|-
|{{TableHeadingColor}} nowrap |'''Links''' || [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17543954 PubMed] Online version:[http://dx.doi.org/10.1016/j.febslet.2007.05.044 10.1016/j.febslet.2007.05.044]
|}
</protect>
==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{| id="O4aecfe3be381d" class=" tableEdit GO_table_reference dataTable"
|- {{table heading style}}
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
clpP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cspC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
cysA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysI
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysK
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
deoT
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
fdx
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
galU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glgA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
glgX
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glnD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
greA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
hfq
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
lon
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mdtH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mgtA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
miaA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nlpD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nudB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
nusB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
phoP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoQ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pgm
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
proW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pstA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
purC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
purH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pyrE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rbfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rfaH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rnt
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpmJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpoN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rpoS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpsF
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
serA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ubiG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
ybhE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yciU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ydcS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ygdD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yhbG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ynfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yobG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yqgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.166519.O4aecfe3be381d&page=166519&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==See also==

==References==
{{RefHelp}}
<references/>

PMID:17543954

2012-03-20T14:27:37Z

Obriantkm: Table edited by Obriantkm via TableEdit

{{RightTOC}}
<protect>
 '''Eydallin, G, Viale, AM, Morán-Zorzano, MT, Muñoz, FJ, Montero, M, Baroja-Fernández, E and Pozueta-Romero, J''' (2007) Genome-wide screening of genes affecting glycogen metabolism in Escherichia coli K-12.''FEBS Lett.'' '''581''':2947-53

{|{{Prettytable}} align = 'center' width= '70%'
|-
|{{TableHeadingColor}} |'''Abstract''' || <protect>A systematic and comprehensive gene-disrupted mutant collection of E. coli K-12 was used to identify genes whose deletions affect glycogen accumulation. Of the 3985 non-essential gene mutants of the collection, 35 displayed a glycogen-excess phenotype, whereas 30 displayed either glycogen-less or glycogen-deficient phenotypes. The genes whose deletions affect glycogen accumulation were classified into various functional categories, including energy production, envelope composition and integrity, protein translation and stability, transport of inorganic ions and nucleotides, and metabolism of carbohydrates and amino acids. The overall data indicate that glycogen metabolism is highly interconnected with a wide variety of cellular processes in E. coli.</protect>
|-
|{{TableHeadingColor}} nowrap |'''Links''' || [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=17543954 PubMed] Online version:[http://dx.doi.org/10.1016/j.febslet.2007.05.044 10.1016/j.febslet.2007.05.044]
|}
</protect>
==Significance {{HelpIcon|Help:Literature}} ==
{{LitSignificance}}

== Useful Materials and Methods {{HelpIcon|Help:Literature}}==
{{LitMaterials}}

==Annotations {{HelpIcon|Help:Literature}}==
<protect>

{| id="O4aecfe3be381d" class=" tableEdit GO_table_reference dataTable"
|- {{table heading style}}
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|
clpP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from Mutant Phenotype
|

|
P
|
glycogen-excess mutant
|
complete
|-
|
clpP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cspC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
cysA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysI
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysK
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
cysW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
deoT
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
dsbB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
fdx
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
galU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glgA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
glgP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
glgX
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
glnD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
greA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
hfq
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
iscU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
lon
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mdtH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
mgtA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
miaA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nlpD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
nudB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
nusB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
phoP
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
phoQ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pgm
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
proW
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pstA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
pstS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
purC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
purH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
pyrE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rbfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rfaH
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rnt
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpmJ
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpoN
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
rpoS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
rpsF
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
serA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
serC
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ubiG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-less
|
complete
|-
|
ybhE
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yciU
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ydcS
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ygdD
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete
|-
|
yhbG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
ynfA
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yobG
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-excess
|
complete
|-
|
yqgB
|
Contributes to
|
GO:0005978
|
glycogen biosynthetic process
|
IMP: Inferred from mutant phenotype
|

|
P
|
Glycogen-deficient
|
complete

|- class="tableEdit_footer"
|[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=63ce1649aab8b3180235b0af7618f667.166519.O4aecfe3be381d&page=166519&pagename={{FULLPAGENAMEE}}&type=0&template=GO_table_reference edit table] || || || || || || || ||
|}
</protect>

==EcoliWiki Links {{HelpIcon|Help:Literature}} ==
{{LitLinks}}

==See also==

==References==
{{RefHelp}}
<references/>

PMID:17543954

2012-03-20T13:59:40Z

Obriantkm: Table edited by Obriantkm via TableEdit

PMID:17543954

2012-03-20T13:58:25Z

Obriantkm: Table edited by Obriantkm via TableEdit