Phage lambda cro:Gene Product(s)

2010-09-16T14:39:26Z

Mmossing: /* Structure figures */

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<noinclude>{{TabsTop}}
{{Tab|Quickview|Phage lambda cro}}{{Tab|Gene|Phage lambda cro}}{{Tab On|Gene Product(s)|Phage lambda cro}}{{Tab|Expression|Phage lambda cro}}{{Tab|Evolution|Phage lambda cro}}{{Tab|On One Page|Phage lambda cro}}{{TabsBottom}}
{|
|-
|{{Sub}}[[#Nomenclature |Nomenclature]]
|{{Sub}}[[#Function |Function]]
|{{Sub}}[[#Interactions |Interactions]]
|{{Sub}}[[#Localization |Localization]]
|{{Sub}}[[#Sequence|Sequence]]
|{{Sub}}[[#Domains/Motifs/Modification Sites|Domains]]
|{{Sub}}[[#Structure|Structure]]
|{{Sub}}[[#Gene Product Resources|Resources]]
|{{Sub}}[[#Accessions in Other Databases |Accessions]]
|{{Sub}}[[#Links |Links]]
|{{Sub}}[[#References| References]]
|{{Sub}}[[Talk:{{PAGENAMEE}}| Suggestions]]
|}
</noinclude>
==Nomenclature==

{{Product_nomenclature_help}}
{| class=" tableEdit Product_nomenclature_table"

|-
!align=left {{table heading style}} |Standard name
||
cro
|-
!align=left {{table heading style}} |Synonyms
||
cro, lambdap57
|-
!align=left {{table heading style}} |Product description
||

|-
!align=left {{table heading style}} |EC number (for enzymes)
||

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|}


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===Notes===

==Function==
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<big>'''Gene Ontology'''</big>

{{Product_GO_help}}
{| {{Prettytable}} class=" tableEdit GO_table_product dataTable"
|- {{table_heading_style}}
!|Qualifier!!GO ID!!GO term name!!Reference(s)!!Evidence Code!!with/from!!Aspect!!Notes!!Status
|-
|

|
GO:0016566
|
specific transcriptional repressor activity
|
PMID: 5269249
|
IMP: Inferred from Mutant Phenotype
|

|
F
|
Cro is required for lytic induction.
|
complete

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|}


<span id="Interactions"></span><big>'''Interactions '''</big>
<protect>
{{Product_interactions_help}}
{| id="M4a848f76b7ad2" class=" tableEdit Product_interactions_table dataTable"
|- {{table heading style}}
!|Partner Type!!Partner!!Notes!!References!!Evidence

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|}
</protect>


===Notes===

==Localization==

{{Product_localization_help}}
{| class=" tableEdit Product_localization_table"
|- {{table heading style}}
!|Compartment!!Description!!Evidence!!Source!!Notes

|- class="tableEdit_footer"
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..I46a938613f8b6&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_localization_table edit table]</span> || || || ||
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===Notes===

==Structure and Physical Properties==
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<span id="Sequence"></span><big>'''Physical Properties'''</big>

{{Product_physical_properties_help}}
{| {{Prettytable}} class=" tableEdit Product_phys_prop_table"

|-
!align=left {{table heading style}} |Sequence
||
<pre>MEQRITLKDY AMRFGQTKTA KDLGVYQSAI NKAIHAGRKI FLTINADGSV YAEEVKPFPS
NKKTTA</pre>
|-
!align=left {{table heading style}} |Length
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66
|-
!align=left {{table heading style}} |Mol. Wt
||
7.363 kDa
|-
!align=left {{table heading style}} |pI
||
10.2 (calculated)
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!align=left {{table heading style}} |Extinction coefficient
||
4,470 (calc based on 3 Y, W, and C residues)

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|}


<span id="Domains/Motifs/Modification Sites"><big>'''Domains/Motifs/Modification Sites'''</big></span><table>
<tr align="left" valign="top">
<td>
{{Product_domains_motifs_help}}
{| class=" tableEdit Product_motif_table dataTable"
|- {{table heading style}}
!|Type!!Residues!!Description!!Notes!!References

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|}
</td>
<td>


<motif_map/>
</td>
</tr>
</table>

<table><tr valign='top'><td>
<span id='Structure'></span><big>'''Structure'''</big><br />

{{Product_structure_help}}
{| class=" tableEdit Product_structure_table"

|-
!align=left {{table heading style}} |Structures
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<beststructure>
gene=Phage_lambda_cro
taxon=10710
</beststructure>
|-
!align=left {{table heading style}} |Models
||
View models at:
* [http://dragon.bio.purdue.edu/ecolpredict2/localsearch/cgi-bin/search3.cgi?q=recA EcoliPredict]
* [http://modbase.compbio.ucsf.edu/modbase-cgi/model_search.cgi?searchmode=default&displaymode=moddetail&searchproperties=ALL&searchvalue=recA&organism=562&organismtext= ModBase]
* [http://bioinf.cs.ucl.ac.uk/psipred/ PSI-PRED]
* [http://www.ebi.ac.uk/msd-srv/pqs/ Protein Quaternary Structure] (PQS)
* [http://spock.genes.nig.ac.jp/~genome/search.html Genomes TO Protein] (GTOP)

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</td><td></protect>
==== Structure figures ====

{|{{Prettytable}} align='right'
|-
|<small>See [[Help:Jmol in EcoliWiki]]</small><br />
Bacteriophage Lambda Cro bound to Operator DNA; 6Cro.pdb<br />
<jmol>
<jmolApplet>
<color>white</color>
<uploadedFileContents >6CRO_2.pdb</uploadedFileContents>
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</td><tr><table></protect>

===Notes===

==Gene Product Resources==
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{{Product_resources_help}}
{| class=" tableEdit Product_resource_table"
|- {{table_heading_style}}
!|Resource type!!Source!!Notes/Reference

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|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=421aa90e079fa326b6494f812ad13e79..P46a9386245992&page=&pagename={{FULLPAGENAMEE}}&type=&template=Product_resource_table edit table]</span> || ||
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===Notes===

==Accessions in Other Databases==
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{{Gene_accessions_help}}
{| {{Prettytable}} class=" tableEdit Gene_accessions_table"
|- {{table_heading_style}}
!|Database!!Accession!!Notes
|-
|
[http://beta.uniprot.org/uniprot/ UniProt]
|
[http://beta.uniprot.org/uniprot/P03040 UniProt:P03040]
|

|-
|
[http://www.ncbi.nlm.nih.gov/sites/entrez?db=Protein GenBank]
|
[http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?db=protein&val=NP_040629 GenBank:NP_040629]
|

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===Notes===

==Links==
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{| class=" tableEdit Links_table"
|- {{table_heading_style}}
!|Name!!URL!!Comments
|-
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|

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<noinclude>
==References==
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{{RefHelp}}
<references />
__NOTOC__
===Categories===
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File:6CRO 2.pdb

2010-09-16T14:26:02Z

Mmossing:

{|{{Prettytable}} align='right'
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Bacteriophage Lambda Cro bound to Operator DNA; 6Cro.pdb<br />
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File:6CRO 2.pdb

2010-09-16T13:49:22Z

Mmossing:

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File:6CRO 2.pdb

2010-09-16T13:44:37Z

Mmossing:

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File:6CRO 2.pdb

2010-09-16T13:41:47Z

Mmossing: {{subst:Jmol_template}}

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File:6CRO 1.pdb

2010-09-16T13:38:54Z

Mmossing: Bacteriophage Lambda Cro Dimer bound to Operater DNA; Biological Assembly; Albright and Matthews (1998) J.Mol.Biol. 280: 137-151

Bacteriophage Lambda Cro Dimer bound to Operater DNA; Biological Assembly; Albright and Matthews (1998) J.Mol.Biol. 280: 137-151

File:Comaln.pdb

2010-09-16T13:10:15Z

Mmossing: Cro Dimer bound to DNA from 6Cro.pdb

Cro Dimer bound to DNA from 6Cro.pdb

EcoliWiki - User contributions [en]

Phage lambda cro:Gene Product(s)

File:6CRO 2.pdb

File:6CRO 2.pdb

File:6CRO 2.pdb

File:6CRO 2.pdb

File:6CRO 1.pdb

File:Comaln.pdb