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	<id>https://ecoliwiki.org/colipedia/api.php?action=feedcontributions&amp;feedformat=atom&amp;user=173.224.112.96</id>
	<title>EcoliWiki - User contributions [en]</title>
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	<updated>2026-11-02T22:33:55Z</updated>
	<subtitle>User contributions</subtitle>
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	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=User:Beuning&amp;diff=1217720</id>
		<title>User:Beuning</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=User:Beuning&amp;diff=1217720"/>
		<updated>2011-02-24T09:13:55Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: Fill User: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;Click &amp;quot;edit table&amp;quot; in the last row to add information to the table. Click [[Help:Adding_your_information|here]] to find out how to add more information to your user page. &lt;br /&gt;
&lt;br /&gt;
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{|   id=&amp;quot;G4d66215256715&amp;quot;  class=&amp;quot; tableEdit User_info_table&amp;quot;  &lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Name (Last, First)&lt;br /&gt;
||&lt;br /&gt;
Beuning, Penny&lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Organization&lt;br /&gt;
||&lt;br /&gt;
Northeastern University&lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Position&lt;br /&gt;
||&lt;br /&gt;
 &lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Address&lt;br /&gt;
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 &lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Contact Info&lt;br /&gt;
||&lt;br /&gt;
 &lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Website(s)&lt;br /&gt;
||&lt;br /&gt;
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|-&lt;br /&gt;
!align=left  |Interests&lt;br /&gt;
||&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Genes&lt;br /&gt;
||&lt;br /&gt;
&lt;br /&gt;
|-&lt;br /&gt;
!align=left  |Lab members&lt;br /&gt;
||&lt;br /&gt;
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|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
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==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=User:Beuning&amp;diff=1217719</id>
		<title>User:Beuning</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=User:Beuning&amp;diff=1217719"/>
		<updated>2011-02-24T09:13:53Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New User: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0004559_!_alpha-mannosidase_activity&amp;diff=1210769</id>
		<title>Category:GO:0004559 ! alpha-mannosidase activity</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0004559_!_alpha-mannosidase_activity&amp;diff=1210769"/>
		<updated>2010-12-02T01:14:31Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0004559_!_alpha-mannosidase_activity}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0015923_!_mannosidase_activity&amp;diff=1210768</id>
		<title>Category:GO:0015923 ! mannosidase activity</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0015923_!_mannosidase_activity&amp;diff=1210768"/>
		<updated>2010-12-02T01:13:03Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0015923_!_mannosidase_activity}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0006520_!_cellular_amino_acid_metabolic_process&amp;diff=1200181</id>
		<title>Category:GO:0006520 ! cellular amino acid metabolic process</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0006520_!_cellular_amino_acid_metabolic_process&amp;diff=1200181"/>
		<updated>2010-10-11T05:45:10Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0006520_!_cellular_amino_acid_metabolic_process}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=PMID:18536691&amp;diff=1200180</id>
		<title>PMID:18536691</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=PMID:18536691&amp;diff=1200180"/>
		<updated>2010-10-11T05:44:38Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: Fill PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{RightTOC}}&lt;br /&gt;
&amp;lt;protect&amp;gt;&lt;br /&gt;
&amp;lt;span style = &#039;font-size: large&#039;&amp;gt; &#039;&#039;&#039;Feist, AM and Palsson, BØ&#039;&#039;&#039;  (2008) The growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli.&#039;&#039;Nat. Biotechnol.&#039;&#039; &#039;&#039;&#039;26&#039;&#039;&#039;:659-67&amp;lt;/span&amp;gt;&lt;br /&gt;
&lt;br /&gt;
{|{{Prettytable}} align = &#039;center&#039; width= &#039;70%&#039;&lt;br /&gt;
|-&lt;br /&gt;
|{{TableHeadingColor}} |&#039;&#039;&#039;Abstract&#039;&#039;&#039; || &amp;lt;protect&amp;gt;The number and scope of methods developed to interrogate and use metabolic network reconstructions has significantly expanded over the past 15 years. In particular, Escherichia coli metabolic network reconstruction has reached the genome scale and been utilized to address a broad spectrum of basic and practical applications in five main categories: metabolic engineering, model-directed discovery, interpretations of phenotypic screens, analysis of network properties and studies of evolutionary processes. Spurred on by these accomplishments, the field is expected to move forward and further broaden the scope and content of network reconstructions, develop new and novel in silico analysis tools, and expand in adaptation to uses of proximal and distal causation in biology. Taken together, these efforts will solidify a mechanistic genotype-phenotype relationship for microbial metabolism.&amp;lt;/protect&amp;gt;&lt;br /&gt;
|-&lt;br /&gt;
|{{TableHeadingColor}} nowrap |&#039;&#039;&#039;Links&#039;&#039;&#039; ||&lt;br /&gt;
*  [http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&amp;amp;db=pubmed&amp;amp;dopt=Abstract&amp;amp;list_uids=18536691 PubMed]&lt;br /&gt;
Online version:[http://dx.doi.org/10.1038/nbt1401 10.1038/nbt1401]&lt;br /&gt;
|}&lt;br /&gt;
&amp;lt;/protect&amp;gt;&lt;br /&gt;
==Significance {{HelpIcon|Help:Literature}} ==&lt;br /&gt;
{{LitSignificance}}&lt;br /&gt;
&lt;br /&gt;
== Useful Materials and Methods {{HelpIcon|Help:Literature}}==&lt;br /&gt;
{{LitMaterials}}&lt;br /&gt;
&lt;br /&gt;
==Annotations {{HelpIcon|Help:Literature}}==&lt;br /&gt;
&amp;lt;protect&amp;gt;&amp;lt;!--box uid=63ce1649aab8b3180235b0af7618f667.176252.J4cb2a445d9388--&amp;gt;&lt;br /&gt;
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******************************************************************************************&lt;br /&gt;
* &lt;br /&gt;
*   ** PLEASE DON&#039;T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. ** &lt;br /&gt;
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****************************************************************************************** --&amp;gt;&lt;br /&gt;
{|   id=&amp;quot;J4cb2a445d9388&amp;quot;  class=&amp;quot; tableEdit GO_table_reference&amp;quot;  &lt;br /&gt;
|- {{table heading style}}&lt;br /&gt;
!|Gene product!!Qualifier!!GO ID!!GO term name!!Evidence Code!!with/from!!Aspect!!Notes!!Status&lt;br /&gt;
&lt;br /&gt;
|- class=&amp;quot;tableEdit_footer&amp;quot; &lt;br /&gt;
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|}&lt;br /&gt;
&amp;lt;!--box uid=63ce1649aab8b3180235b0af7618f667.176252.J4cb2a445d9388--&amp;gt;&amp;lt;/protect&amp;gt;&lt;br /&gt;
&lt;br /&gt;
==EcoliWiki Links {{HelpIcon|Help:Literature}} ==&lt;br /&gt;
{{LitLinks}}&lt;br /&gt;
&lt;br /&gt;
==See also==&lt;br /&gt;
&lt;br /&gt;
==References==&lt;br /&gt;
{{RefHelp}}&lt;br /&gt;
&amp;lt;references/&amp;gt;&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=PMID:18536691&amp;diff=1200179</id>
		<title>PMID:18536691</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=PMID:18536691&amp;diff=1200179"/>
		<updated>2010-10-11T05:44:37Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New PMID: Page!&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0043546_!_molybdopterin_cofactor_binding&amp;diff=1200178</id>
		<title>Category:GO:0043546 ! molybdopterin cofactor binding</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0043546_!_molybdopterin_cofactor_binding&amp;diff=1200178"/>
		<updated>2010-10-11T05:38:21Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0043546_!_molybdopterin_cofactor_binding}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008236_!_serine-type_peptidase_activity&amp;diff=1200177</id>
		<title>Category:GO:0008236 ! serine-type peptidase activity</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008236_!_serine-type_peptidase_activity&amp;diff=1200177"/>
		<updated>2010-10-11T05:38:01Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0008236_!_serine-type_peptidase_activity}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0042277_!_peptide_binding&amp;diff=1200176</id>
		<title>Category:GO:0042277 ! peptide binding</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0042277_!_peptide_binding&amp;diff=1200176"/>
		<updated>2010-10-11T05:34:59Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0042277_!_peptide_binding}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0015682_!_ferric_iron_transport&amp;diff=1200175</id>
		<title>Category:GO:0015682 ! ferric iron transport</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0015682_!_ferric_iron_transport&amp;diff=1200175"/>
		<updated>2010-10-11T05:33:54Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0015682_!_ferric_iron_transport}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0009220_!_pyrimidine_ribonucleotide_biosynthetic_process&amp;diff=1200174</id>
		<title>Category:GO:0009220 ! pyrimidine ribonucleotide biosynthetic process</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0009220_!_pyrimidine_ribonucleotide_biosynthetic_process&amp;diff=1200174"/>
		<updated>2010-10-11T05:31:48Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0009220_!_pyrimidine_ribonucleotide_biosynthetic_process}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008780_!_acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine_O-acyltransferase_activity&amp;diff=1200173</id>
		<title>Category:GO:0008780 ! acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine O-acyltransferase activity</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008780_!_acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine_O-acyltransferase_activity&amp;diff=1200173"/>
		<updated>2010-10-11T05:30:59Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0008780_!_acyl-(acyl-carrier-protein)-UDP-N-acetylglucosamine_O-acyltransferase_activity}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008741_!_ribulokinase_activity&amp;diff=1200172</id>
		<title>Category:GO:0008741 ! ribulokinase activity</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0008741_!_ribulokinase_activity&amp;diff=1200172"/>
		<updated>2010-10-11T05:22:16Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0008741_!_ribulokinase_activity}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
	<entry>
		<id>https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0019569_!_L-arabinose_catabolic_process_to_xylulose_5-phosphate&amp;diff=1200171</id>
		<title>Category:GO:0019569 ! L-arabinose catabolic process to xylulose 5-phosphate</title>
		<link rel="alternate" type="text/html" href="https://ecoliwiki.org/colipedia/index.php?title=Category:GO:0019569_!_L-arabinose_catabolic_process_to_xylulose_5-phosphate&amp;diff=1200171"/>
		<updated>2010-10-11T05:19:17Z</updated>

		<summary type="html">&lt;p&gt;173.224.112.96: New GO term category page&lt;/p&gt;
&lt;hr /&gt;
&lt;div&gt;{{GO term stub|GO:0019569_!_L-arabinose_catabolic_process_to_xylulose_5-phosphate}}&lt;/div&gt;</summary>
		<author><name>173.224.112.96</name></author>
	</entry>
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